{
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  "Package": "jentre",
  "Title": "Toolkit for the 'Entrez' API",
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  "Authors@R": "c(person(given = \"Carl\",\nfamily = \"Suster\",\nemail = \"carl.suster@sydney.edu.au\",\nrole = c(\"aut\", \"cre\", \"cph\"),\ncomment = c(ORCID = \"0000-0001-7021-9380\")))",
  "Description": "Interact with the 'Entrez' API hosted by the National\nCenter for Biotechnology Information (NCBI),\n<https://www.ncbi.nlm.nih.gov/books/NBK25499/>. This package is\nfocused on working with sequence metadata and links. It handles\npagination and compensates for some API limitations to simplify\nthese tasks. API calls are printed to the console to highlight\nhow high-level queries are translated into individual HTTP\nrequests.",
  "License": "MIT + file LICENSE",
  "Encoding": "UTF-8",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.3",
  "Collate": "'count.R' 'process.R' 'fetch.R' 'id_set.R' 'id_set_validate.R'\n'info.R' 'jentre-package.R' 'link.R' 'post.R' 'request.R'\n'search.R' 'utils.R'",
  "Config/testthat/edition": "3",
  "URL": "https://github.com/cidm-ph/jentre,\nhttps://cidm-ph.github.io/jentre/",
  "BugReports": "https://github.com/cidm-ph/jentre/issues",
  "Config/pak/sysreqs": "libxml2-dev libssl-dev",
  "Repository": "https://cidm-ph.r-universe.dev",
  "Date/Publication": "2026-04-14 06:14:02 UTC",
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    "User": "root"
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  "Maintainer": "Carl Suster <carl.suster@sydney.edu.au>",
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    "entrez",
    "genomics"
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    "extra/citation.json",
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  "_cranurl": true,
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    "efetch",
    "einfo",
    "einfo_databases",
    "elink",
    "elink_map",
    "entrez_api_key",
    "entrez_count",
    "entrez_database",
    "entrez_request",
    "entrez_validate",
    "epost",
    "esearch",
    "esummary",
    "id_list",
    "is_id_list",
    "is_id_set",
    "is_web_history",
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  "_help": [
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      "page": "check_id_set",
      "title": "Check ID set is well formed",
      "topics": [
        "check_id_list",
        "check_id_set",
        "check_web_history",
        "entrez_database"
      ]
    },
    {
      "page": "efetch",
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      "concept": [
        "API methods"
      ],
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      ]
    },
    {
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      "title": "Get details about Entrez databases",
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        "API methods"
      ],
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        "einfo_databases"
      ]
    },
    {
      "page": "elink",
      "title": "ELink API for fetching links between databases",
      "concept": [
        "API methods"
      ],
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        "elink_map"
      ]
    },
    {
      "page": "entrez_count",
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      "topics": [
        "entrez_count"
      ]
    },
    {
      "page": "entrez_request",
      "title": "Construct a request to the Entrez API",
      "topics": [
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        "entrez_request"
      ]
    },
    {
      "page": "entrez_validate",
      "title": "Look up accessions and other IDs on Entrez",
      "concept": [
        "API methods"
      ],
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      ]
    },
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      "concept": [
        "API methods"
      ],
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        "epost"
      ]
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      "concept": [
        "API methods"
      ],
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      ]
    },
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        "API methods"
      ],
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      ]
    },
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      "page": "id_set",
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        "id_list",
        "is_id_list",
        "is_id_set",
        "is_web_history",
        "web_history"
      ]
    },
    {
      "page": "topic-process",
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      "topics": [
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        "topic-process"
      ]
    }
  ],
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